CDS

Accession Number TCMCG016C24640
gbkey CDS
Protein Id OMO57005.1
Location complement(join(4273..4965,5082..5426,5542..5655))
Organism Corchorus capsularis
locus_tag CCACVL1_26085

Protein

Length 383aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01014434.1
Definition Zinc finger, GATA-type [Corchorus capsularis]
Locus_tag CCACVL1_26085

EGGNOG-MAPPER Annotation

COG_category K
Description Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K21630        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000976        [VIEW IN EMBL-EBI]
GO:0000977        [VIEW IN EMBL-EBI]
GO:0000981        [VIEW IN EMBL-EBI]
GO:0001012        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0001085        [VIEW IN EMBL-EBI]
GO:0001228        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTTACCAAACTCACCACCATCCTTTTCTCTTCCAATTCCGCTCCTCCTTTACCTCCATTTCTCCTCTTCCTCCTTCAACCTCTCCCTCGCTTTTGCCTTCGTCTCTTCAGGAAATGGAATGCGTTGAGGGTGCCTTGAAGACCAGTTTTAGAAAAGAGATGGCCTTGAAGTCGAGTCCCCAGACGTTCTTGGACGATATTTGGGTTGTTAATGGTGGACAAAATGGGGTTTCTTGTGATGATTTTTCCGTTGACGACTTGCTTGACTTCACTAACGAAGAGGGTTTACTTGAACAACAAGAGAAGCATGAAGAAGAAGAAGAGGAAGAAGAAGTGCCAATTCCTTCTTCGTCTTCTTCGCCTAAGAGACAAAAGTTATGCCAAGATGACCATATTTCCAACGACACAACCAATTTTGATTACGGTTCTTTATCCACCAACGAACTCGCTGTTCCGGCGGATGACGTGGCGAACCTCGAATGGTTGTCTCATTTCGTTGAGGATTCCTTCTCGGAACACTCTACGGCTTATCCCACCGGAACATTAACGACAAAGCCCAAATTACCAGCCGACAAAGAGCCTGAACAGGAAAAGCCAGTTACTACCACATGTTTCCAAACTCCTGTTCCAGCCAAAGCCAGAAGCAAGCGCGCTCGAACTGGTGCCCGAATTTGGTCCCTTGTCCCTTCCCCTTCACTAACAGAATCCTCGTCAAGTTCCACGTCATCAACGTCCTCCTCCAGCCCCTCAAGTCCTTGGCTTTTTTATCCCTATGGCGGTTATGGTTCAACCTTTGAGCCGTCCGACCCGCTTTCAGTGGAGAAACCGCCGGTTAAGAAGCATAAGAAGAAACTGTCAACCGACTCAGCCGGTGGTAATGGGACCCAGCCGACGCGAAGGTGCAGTCATTGTGGAGTTACCAAGACGCCACAATGGAGAGCCGGTCCAATGGGGGCCAAGACGCTGTGTAACGCTTGTGGAGTCCGGTTTAAGTCGGGACGTCTTTTACCCGAATATAGACCGGCTTGTAGCCCGACTTTTTCAAGTGAGTTGCATTCAAACCATCACCGGAAAGTACTAGAGATGCGGCGCAAGAAAGAAGGTGCCGAACCCGGTCTAACTCCGCCGATTGTTCCCAGTTTTGGATAA
Protein:  
MLYQTHHHPFLFQFRSSFTSISPLPPSTSPSLLPSSLQEMECVEGALKTSFRKEMALKSSPQTFLDDIWVVNGGQNGVSCDDFSVDDLLDFTNEEGLLEQQEKHEEEEEEEEVPIPSSSSSPKRQKLCQDDHISNDTTNFDYGSLSTNELAVPADDVANLEWLSHFVEDSFSEHSTAYPTGTLTTKPKLPADKEPEQEKPVTTTCFQTPVPAKARSKRARTGARIWSLVPSPSLTESSSSSTSSTSSSSPSSPWLFYPYGGYGSTFEPSDPLSVEKPPVKKHKKKLSTDSAGGNGTQPTRRCSHCGVTKTPQWRAGPMGAKTLCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEGAEPGLTPPIVPSFG